一种用于网络模体检测的高效采样算法

An Efficient Sampling Algorithm for Network Motif Detection

Journal of Computational and Graphical Statistics · 2017
被引 11
ABS 3

中文导读

提出一种顺序重要性采样策略,通过逐节点采样子图并利用递归公式估计子图数量,来高效检测网络模体,在四个真实网络中表现优于现有方法。

Abstract

We propose a sequential importance sampling strategy to estimate subgraph frequencies and detect network motifs. The method is developed by sampling subgraphs sequentially node by node using a carefully chosen proposal distribution. Viewing the subgraphs as rooted trees, we propose a recursive formula that approximates the number of subgraphs containing a particular node or set of nodes. The proposal used to sample nodes is proportional to this estimated number of subgraphs. The method generates subgraphs from a distribution close to uniform, and performs better than competing methods. We apply the method to four real-world networks and demonstrate outstanding performance in practical examples. Supplemental materials for the article are available online.

网络分析图算法统计采样计算社会科学