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复杂家庭数据二元事件模型的拟蒙特卡罗方法

Quasi-Monte Carlo Methods for Binary Event Models with Complex Family Data

Journal of Computational and Graphical Statistics · 2022
被引 2
ABS 3

中文导读

针对家庭数据中二元结果的广义线性混合模型,提出一种结合梯度与海森矩阵近似的拟蒙特卡罗方法,大幅提升似然计算速度,并用于瑞典强迫症多代数据研究。

Abstract

The generalized linear mixed model for binary outcomes with the probit link function is used in many fields but has a computationally challenging likelihood when there are many random effects. We extend a previously used importance sampler, making it much faster in the context of estimating heritability and related effects from family data by adding a gradient and a Hessian approximation and making a faster implementation. Additionally, a graph-based method is suggested to simplify the likelihood when there are thousands of individuals in each family. Simulation studies show that the resulting method is orders of magnitude faster, has a negligible efficiency loss, and confidence intervals with nominal coverage. We also analyze data from a large study of obsessive-compulsive disorder based on Swedish multi-generational data. In this analysis, the proposed method yielded similar results to a previous analysis, but was much faster. Supplementary materials for this article are available online.

统计学计算机科学遗传学计量经济学